Can't open after archive install and migration

Hi there, so heres the deal. I recently posted an issue I had with my imac and turned out the only way to save all my data was to do an archive and install. So I upgraded my HD at the same time to a 2 TB. They then installed OS X and did migration with my old drive. Also the reason I had to new drive was because the previous 500 GB drive was nearly full. Anyways, got my computer back today and everything is pretty good aside from missing quicktime 7 in utilities and a couple drivers and my printers but so far thats it aside from FC studio 2. They just won't open so I read some threads on that and seems like majority say to do a clean install of OS x and I just don't want to do that as I finally got everything normal again. I was thinking of just deleting the apps and reinstalling them but figured I would come on here and see if I could get a second opinion. Thanks for your time
Nat

Well for starters I can't back up cause I am away from home and my time machine drive is at home. But if i were to get it home and run a back up would it just back up everything as is right now which is in error. When i say data I mean all the stuff on my imac HD. Documents, photos, movies etc. Something needs to be done cause i see this problem has went to my iphoto as well. Can't open it which is not good. I put a few photos on there since my last back up. Luckily i do still have the drive that cause the was swapped out that still has some of the data on it. So if one was to do a proper reinstall or clean install, what is the process.

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