Can't open Home or Apps from Dock

Hi all,
I've just done an Archive & Install and now can't open the Home or Applications folders from the Dock. When I click on them in the Dock, an icon that looks like a cassette tape appears for a second, then disappears. I can open Home and Apps from the HD folder on my desktop.
Any ideas?
Thanks heaps,
Andrew

I can put the Applications and Home icons in the Dock (next to the Trash) but neither folder will open from there. I have to go to my Mac HD folder on the desktop to open both. It seems there's some problem with the shortcut, but the actual folders are there and open OK, just not from the Dock.
Yes, Trash opens fine.
If it sheds any light, I'm noticing strange things since doing the Archive & Install. For example, Column View doesn't stick (after setting it in Apple > Dock > Dock Preferences to 'always open in column view') and I'm unable to download Acrobat Reader (it returns an error message saying it's not compatible with my system). And others things I won't bore you with...

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