Can't skip to end of song

I replaced an older lesser quality mp3 with a higher quality version by replacing the original file. I've done this hundreds of times without a problem. I'm using 10.6.1, and when I replaced a song in this manner yesterday, I am unable to click on the end of the timeline of the song. It will only advance to the :35 second mark left in the song. Fast forwarding through the song also stops at the same point. It refuses to advance beyond that :35 left mark except by letting it play normally. I know the new file advances fine in iTunes if I drag it into iTunes and create a duplicate version.
Is there some metadata from the old file that is causing iTunes to think the new file ends early because it is a few megs larger? Can this be cleared by a method other than reimporing the song new? I'd like to keep the Date Added, Ratings, and Play count info.
Thanks.

I did some checking and this isn't a problem with just 10.6. Files I imported under 10.5.8 exhibit the same behavior.
There has to be some way to force iTunes to rescan a file. I tried dropping the folder with the songs onto iTunes. It duplicated a few of the songs having the problem, not all, but didn't fix the ones it didn't duplicate.

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