Can't start any program after upgrading to Mavericks from Mountain Lion.

After upgrading my Macbook Pro from Mountain Lion to Mavericks, I can't start any program from the dock or finder.  The screen flashes briefly gray, then returns to the desktop.  I repairded permissions from the recovery partition.

No need to repair permissions from the recovery partition. You can do that using the Disk Utility app located in HD > Applications > Utilities.
As for the issues with your Mac. Check to see if the startup disk needs reparing. (not the same as permissions)
The startup disk may need repairing ...
Launch Disk Utility located in HD > Applications > Utillities
Select the startup disk on the left then select the First Aid tab.
Click:  Verify Disk  (not Verify Disk Permissions)
If DU reports errors, restart your Mac while holding down the Command + R keys. From there you should be able to acces the built in utilities in  OS X Recovery
Make sure to back up all important files first before using OS X Recovery.

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    Last sector (1454211072-1954210086, default = 1954210086) or {+-}size{KMGTP}: 1954209791
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    Logical sector size: 512 bytes
    Disk identifier (GUID): 6ED0C429-00D1-4759-B50E-04B6FB80D0E3
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       2          409640      1452940543   692.6 GiB   AF00  Customer
       3      1452940544      1454210079   619.9 MiB   AB00  Recovery HD
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      BSD: not present
      APM: not present
      GPT: present
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    Logical sector size: 512 bytes
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       3       401060384       402329919   619.9 MiB   AB00  Re
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    Set the bootable flag? (Y/N): n
    Creating entry for GPT partition #3 (MBR partition #3)
    Enter an MBR hex code (default AB): AB
    Set the bootable flag? (Y/N): n
    Creating entry for GPT partition #4 (MBR partition #4)
    Enter an MBR hex code (default 07): 07
    Set the bootable flag? (Y/N): y
    Recovery/transformation command (? for help): w
    Final checks complete. About to write GPT data. THIS WILL OVERWRITE EXISTING
    PARTITIONS!!
    Do you want to proceed? (Y/N): y
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    Warning: Devices opened with shared lock will not have their
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    Warning: The kernel may continue to use old or deleted partitions.
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    Command (? for help): n
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    Last sector (1454211072-1954210086, default = 1954210086) or {+-}size{KMGTP}: 1954209791
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    Logical sector size: 512 bytes
    Disk identifier (GUID): 6ED0C429-00D1-4759-B50E-04B6FB80D0E3
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       1              40          409639   200.0 MiB   EF00  EFI System Partition
       2          409640      1452940543   692.6 GiB   AF00  Customer
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