Cannot capture using log & transfer because warning message

Hi,
I recently switched cameras - from using a Canon Mini DV ZR 900 to a Panasonic SDR-H85. Of course when I plug in the new camera to the computer via USB, FCE4 doesn't recognize it because it's AVCHD. The media (video clips & stills) is transferred anyway via Adobe Bridge and stored in a designated folder on my hard drive. I then converted the video clips from .MOD to .MOV with MPEG Streamclip. The converted clips are saved in a different folder. I also did the easy set up changing the format to Apple Intermediate Codec and use to AVCHD 1440X1080i60. So then I start a new project and try to do log and transfer but when I try to add the folder containing the converted clips, I get a warning window that says that the folder contains unsupported media or has an invalid directory structure and to please choose a folder whose directory structure matches supported media. Can someone please tell me what is wrong or what I'm missing? I need to have a way to identify and organize these clips. Thanks!

Okay, as soon as I get my next check. Judging by your response and what I read on the Apple site, that will solve my problem? I sure hope so. One of the reasons I switched from recording to tape to hard drive is because an Apple Store techie assured me it would be much easier capturing using log and transfer rather than the long drawn out process I was using with tape (making subclips, etc.). So I was pretty upset to encounter this obstacle. I wasn't warned about the perils of AVCHD, and reading the process in your book it didn't seem like it should have been a problem anyway. So I'm still quite confused. But that's okay. I'll be happy enough just to have something working finally! Thanks

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As mentioned earlier I also have the original .mts files. Everything was shot AVCHD 1080p.
Short of slogging through thousands of incorrectly labeled .mov files I was thinking of just starting fresh with Log & Capture of the original .mts files.
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Cannot capture using log & transfer because warning message

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