Cannot center Smart Guides exactly? CS6

Hello: Level: Newbie OS: Windows 7 64 bit Illustrator CS6
I am learning about Smart Guides but have found myself a bit perplexed.
I have drawn a Circle with the Ellipse tool by clicking and then entering the values: 432x432
Then I hover the mouse over the "center" square which reads: x:260 & y:259.5 which doesn't make sense to me ~ if it is the Center shouldn't the x & y values match? Any way, so then I manually type in the x & y value boxes 260.000 and they both stay at 260.
However, when I pull out the Smart Guides and place the horizontal guide over the center the x & y values also do not match and so I enter the number manually but the values will not stay where I set them.
e.g. The x value states: 259.5 and the y value: 260.000 and no matter how many times I reset the x value it always reverts back to 259.5 ... ???
The vertical smart guide is also off by rougly .5
Now, since I am attempting to make a symmetrical object ... won't this differentiation cause "eye sores" once the artwork is done?
I am (still) attempting to construct a compass with a rose, increments, needle etc. etc. and my first attempt ... and I quote the awesome Jacob ...
looks as if I have dropped it on the floor
So, after all that ramble'n ... I suppose I would like to know from others if this is just the way things are and rather I am suppose to just deal with things being a "bit" off??
Thank you for your time
hope you're having a great day/night

Hey Jacob ...
So, I did the Move the Folder but ... dang'it I'm slow at times ... and so, I am unsure if I followed your directions right ...
I signed into my computer under admin and then when I searched my C drive for the Adobe Illustrator CS6 Settings folder ... two folders came up
One for the Admin account and one for mine
So, I right clicked on both of them and chose ... Move to Desktop ... placing both folders on the Desktop of the Admin
Then I restarted my computer and logged in under my user name not as the Admin & then opened Illustrator but I am still having the same problems.
The Align tool doesn't Align so I gotta eye things out. The first compass I showed you was a result of "listening" to illustrators X/Y/H/W settings.
And when I have the Align to Pixel Grid ON I still do not have integer values when they ought to very well be integers.
So, I just hoping I didn't go about things the right way.
I am now going to go log back into my pc as an Admin and undo the Moved folders and give things a go again.
Jacob ... you've been such a huge support to me that I cannot thank you near enough!!
PS. to check things I made a circle that's 300x300 > the W = 300 and H = 300 and the X = 250 and the Y = 250 < the Align to Pixel Grid is on
Then I choose the Line tool and make a Line of 20px > then directly below I make an other Line of 20px with the Align to Pixel Grid on ...
I select the top 20px Line and the Values are: X = 249.5 and Y = 132 H = < Align Pixel Grid is on
I select the bottom one and X = 250 and Y = 358 and H = 20 and W = 0 < Aliign Pixel Grid on
Then I Group them both and the values are: X = 249.5 and Y = 245 and H = 246 and W = 0
Then I Rotate by 20 degrees and the first set Values are: same as just above
The next set Values are: X = 249.5 and the rest is the same as above
The next set Values are: X = 249.5 and Y = 245 and H = 231.164 and W = 84.137
As I go around the H & W values keep changing. After all you've patiently taught me ... they shouldn't change? OR the H & W do change b/c the bounding boxes outline the Path and Not the line itself ... right?
The 5th copy Values change to: X = 249.5 and Y = 244.999 and so on from there. Not to beat a dead horse but is this how it ought to be?
Uhhh sigh ... ...

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