Cannot get MacPro to allow me to boot to an alternative boot disk. Can choose in control panel but will not use the disk to boot. Also won't boot using disk selected using option key

My primary boot disk is encrypted as is a secondary boot disk (backup) but I cannot boot using any other disk. System 10.8.5, MacPro 4.1.
All disks mount using primary boot disk. All disks check out as OK and I have repaired permissions.
When I choose in the control panel the Mac boots but will always use my original boot disk.
When I select the disk using the option key at startup, the boot process stalls with a grey screen and a spinning cursor.
Thanks,
Dave

Still trying to figure this out. I erased the drive, did a format using disk util and then re-installed the system but I still cannot get the disk used as a startup drive. I also tried an external firewire drive and it won't allow me to boot from it either.
I can choose it starting up with the option key but it just gives me a blue screen and the spinning cursor.
If I select it in the startup pref pane it boots into my other startup drive only.
DaveLon

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