Cannot publish changes since upgrade to iWeb09

Hello,
I created and edited a website using iWeb08, and then upgraded to 09. I made some changes including deleting photos and adding new ones, and tried publishing directly to my (non mobileme hosted) site. This failed -- it seemed to be ok but then no changes appeared, so I republished the whole site and it said there was a problem communicating to the ftp. Then I published to a folder and uploaded the assets.http file, index.html file, and the file with all the folders to my ftp directly. No changes have appeared even after clearing the cache!
Please help me

I should rephrase the problem-
-I cannot double click on anything! even if I go into iphoto and double click on a photo I want to see, I have to do the alt+click(right click) to open the photo!, this also happens for any folder(or the HDD icon) on my desktop. This only happened after I upgraded to leopard (2 weeks after purchasing my new macbook). I will try to log on as a different user and report back. Thanks

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