Canon 6D RAWs processed awfully bad?!

Hi,
I previously owned a Canon 400D and loved Aperture for the entire workflow, it was just a breeze. Now got a new Canon 6D and also took some test photos with the 5D mk3, and every Raw that I import just looks awfully dark and contrasty.
That is, for a moment they look nice, and then, when they're fully loaded, they turn dark and contrasty.
I thought something would be wrong with the cameras, but opened up some of the pictures in lightroom or in Photoshop, using the adobe raw processor, and there, everything looks nice.
I never knew that the aperture raw processing was so bad, not just with colors, but also with noise reduction for example. Am I doing anything wrong, maybe with some secret color space setting or so (cam is set to sRGB), or are the raw profiles in aperture for these new cameras just not implemented properly yet?
Example Images:
Aperture:
http://chfilm.de/download/foto/IMG_0324A.jpg
Adobe Raw Conversion (nothing done, except hit auto adjust and increased the luma denoise a bit)
http://chfilm.de/download/foto/IMG_0324LR.jpg
what is going on?? I seriously what have never expected such an enormous impact on image quality by the software, especially since I thought Aperture was a Pro-tool. Look at the sharpness of the images!!

I have been fortunate enough to recently upgrade myself to a Canon EOS 6D. After my first shoot, I was heartbroken to see the poor quality of the images--dark, low contrast, etc. This was fixable in Aperture with some effort, but then I started noticing serious blue and orange color artifacts around high-contrast edges, and a near total loss of detail in deeper shadows. I was about to return the 6D as defective but then tried a couple images in Canon's RAW processing software. And I was blown away by the results--gorgeous images, perfect contrast and loads of shadow detail that could be extracted with the right adjustments. I also grabbed a trial of Lightroom, which produced results similart to Canon's software.
So there's nothing wrong with the camera. Apple's RAW converter for the 6D is just flat busted. How could something this bad have actually made it out the door?
I've been a long-term Aperture user--since version 2.0, and have grown to love the interface and the effortless workflow for organizing images. But the issues with the 6D RAW converter have pretty much forced me to abandon Aperture over night. Hello Lightroom.
As with previous comments, I suspect this is really just part of the thin end of the wedge with Aperture and that it may be headed for extinction. Sad.
Here is an example that shows the shadow issues. Both are 100% views of he same RAW file loaded without any additional adjustments--except that I've cranked up the shadow level to illustrate the Aperture RAW converter's failure:

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