CC 3-Way: How to Limt Effect to a Limited Area?

What's the best way to have a filter (in this case the 3-way Color Corrector with the Limit Effect controls on) affect only a portion of the overall image -- let's say part of the lower right quadrant, where the boundary of that region can be also be "feathered", a la a selection in Photoshop?
Am having to apply the CC 3-way to a number of clips, in each case using the Limit Effect controls to isolate (and then change) a particular color. In some clips though, the matte I create works great for most of the image, but isn't quite right for one specific area. Adjusting the various Limit Effect controls to correct for that one area screws up the matte everywhere else.
If I add a second CC 3-way filter to take care of that one isolated region, I obviously want it to affect only that one isolated region. But am getting frustrated in my attempts to create a soft-edged matte to accomplish that without affecting all the other filters above and below in the stack.
I'm sure there's a way to do this, but can't seem to clear my brain enough to see what it would be.
Suggestions much appreciated.
John Bertram
Toronto
(FCP 5.1.4)

Layer the footage and use the garbage matte to
isolate the area you want.
Just to clarify, is that the route I was actually starting to consider earlier (but then abandoned thinking there had to be a way to do it within the one track):
i.e.: Copy the clip's video up one track, do the matte + customized filter thing on the upper track, after which that isolated part of the image blocks out the identical but improperly filtered area below it.
I guess the only downside will be that when I adjust one of the other filters in the stack (changing the contrast or diffusion levels, for example), I'll have to remember to make the exact same change in the duplicated stack of filters one track up.
And should I also take from your suggestion of the two-track workflow that there is indeed no FCP equivalent to the Photoshop technique of making a selection, and then creating an adjustment layer which applies only to that selected area?
Thanks,
jb

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