Certain pictures are oblong format but thumbnails are upright format

Hi!
The iPhoto on my wifes iMac (G5 iMac,MacOS 10.4.10, iPhoto 6.0.6) shows a bizarre behaviour since a couple of days:
Some pictures that were taken in upright format, first appeared in oblong format (which is normal). After my wife has turned them in iPhoto to the upright format, they appear upright in the overview. But if you doubleclick them, they are displayed in oblong format. An export of these pictures showed, that the originals were not turned to upright format but just the thumbnails.
Affected are only newly turned pictures, not the older ones.
I already launched iPhoto holding down command-option and rebuild the library and the thumbnail cache, but this did not help.
What else could I try?

I now know, when the phenomenon appears:
It appears, when I import the pictures using a card reader instead of connecting the camera directly to the computer.

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