Checking for new mail

Using an eMac with Tiger 10.4.11. Getting message that home folder is full and can't load anymore messages. We click OK and then new messages are there. Tried erasing files from home folder with no change. We recently received a message that "mail had a bad file" and needed to be reloaded. Did the reload of some 65,000 messages. Where are these messages stored on the "server" and why can't I get them? As I understand it my deleted messages are stored on the Apple server. I also have a MacBook using the same mail accounts and have no problems at all with same mail. Help please.
Using "Mail Version 2.1.3 (753.1)

Ooops. When I opened the mail this morning I had the same message pop up. As I can't paste an attachment here I will enter the message.
+"Mail cannot update your mailboxes because your home directory is full. You must free up space in your home folder before using Mail. Delete unneeded documents or move documents to another volume."+
I'm assuming that my "home folder" is the users home folder that appears as a house on the sidebar. I'm in the process of moving 12.5 GB of movies to my Seagate FreeAgent external hard drive and deleting same from internal hard drive thusly freeing up space in the home folder. Does this make sense to you?
Thanks

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    Build Info: Mail-9140000~1
    Code Type: X86 (Native)
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    Date/Time: 2008-02-10 09:00:25.820 +0100
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    Report Version: 6
    Exception Type: EXC_CRASH (SIGABRT)
    Exception Codes: 0x0000000000000000, 0x0000000000000000
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    Thread 19 Crashed:
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    2 libSystem.B.dylib 0x9362cd3f abort + 73
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    Identifier: com.apple.mail
    Version: 3.1 (914)
    Build Info: Mail-9140000~1
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    10 com.apple.MessageFramework 0x00385f96 -[MessageStore appendMessages:unsuccessfulOnes:newMessageIDs:] + 63
    11 com.apple.MessageFramework 0x00385f51 -[MessageStore appendMessages:unsuccessfulOnes:] + 56
    12 com.apple.MessageFramework 0x00360330 -[MessageStore finishRoutingMessages:routed:] + 388
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    14 com.apple.CoreFoundation 0x938d7b9d _invoking__ + 29
    15 com.apple.CoreFoundation 0x938d7588 -[NSInvocation invoke] + 136
    16 com.apple.MessageFramework 0x003d0a05 -[MonitoredInvocation invoke] + 409
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    18 com.apple.Foundation 0x9393804d -[NSThread main] + 45
    19 com.apple.Foundation 0x93937bf4 _NSThread__main_ + 308
    20 libSystem.B.dylib 0x93569075 pthreadstart + 321
    21 libSystem.B.dylib 0x93568f32 thread_start + 34
    Thread 17 crashed with X86 Thread State (32-bit):
    eax: 0x0000003c ebx: 0x936191cf ecx: 0xb04520ac edx: 0x9361967e
    edi: 0xa0499f00 esi: 0xb0452108 ebp: 0xb04520e8 esp: 0xb04520ac
    ss: 0x0000001f efl: 0x00000247 eip: 0x9361967e cs: 0x00000007
    ds: 0x0000001f es: 0x0000001f fs: 0x0000001f gs: 0x00000037
    cr2: 0x20496050
    Thanks, hope someone can help me out with what to do.
    Cheers Nikolaj
    Message was edited by: nsode

    Hello Barry
    Thanks for your reply, it did the trick, in a weird sort of way:
    After deleting the mail preference file as you suggested, I could check for new mail messages without Mail.app crashing all over the place.
    However all my accounts and the messages in them was gone. Okay, one problem solved and new one created.
    Solution: Reinstalling my wifes and my own mail accounts and reimporting all the messages from the backup. Sounds boring right?
    So I threw caution to the wind and replaced the new preference file with the old one that I had kept in the (disabled) folder. Thinking that it was an easily reversible step.
    And it ruddy worked! Now I can again check for new mail messages and I have the old mail accounts intact. The logic of this however escapes me.
    The morale: Its a weird world sometimes;-)
    Thanks again for your help, it is much appreciated.
    cheers Nikolaj

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