Clearing old files at startup

I apologize if this question has been asked but I'm not sure how to phrase it...When I start a project I'm working on it continues to ask me about files that are no longer part of the project; the "file_name cannot be found." dialog box. How do I clear this information so I don't have to continually go through it?
Thanks!

Even if your audio file is not in the Arrange window anymore, it's probably in the Audio window. Go to the Audio window (Command-9), select the file and delete it from there.

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