Clip Notes aspect ratio wrong

I have AE CS3 on an Intel 8. Would like to use Clip Notes for low-rez approvals, but when I render a Quicktime movie in 3 x 4 aspect ratio (like most video) when I open the pdf in Acrobat Reader 8.1.2, it stretches it to 16 x 9. Checked all the preferences and view options and can't find anything to change it. Searched through the render options in AE, and can't find anything in there either. Tried the NTSC presets, tried using Stretch, nothing makes any difference.
Also, the audio sounds very bad. I've seen demos of Clip Notes that looked great, but demos usually do.
Please help. I'd like to use this potentially great feature.
RD

Sorry, that was a typo. Since then I've done more tests. The default size ClipNotes wants for regular video is 640 x 480. But when I render it that way in AE-CS3, and open the PDF in Acrobat 8.1.2, it gets stretched to widescreen. There seems to be no way to control this. So then I go back, nest the 640 x 480 in a comp that is 854 x 480, which is the default size ClipNotes specifies, and render it with black pillars on the sides. When I open this PDF, it looks correct and not stretched. I can live with the black pillars until they fix this.
BUT, the fatal flaw is, the audio. It sounds terrible, like the music is doing a constant phase-shifter effect. I tried it at 48 and 44 kHz, and made sure the settings matched in the output module and the ClipNotes audio settings, and it made no difference.
Thanks for your thoughts on this, but do people from Adobe ever read these posts? I have read several posts about this audio problem here and on Creative Cow. I hope they fix it or tell me what to do soon. Try it with a clip that has music, and you will immediately see what I am talking about.

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