Coloring issues with magic wand tool and paint bucket tool, leaves uncolored areas near drawn lines

Photoshop CS6 doesn't color properly.  Whetever I use brush tool or elliptical marquee tool to do the lines (with brush tool I use Hard Round, not soft), it doesn't color the whole area when i fill them with color. This happens with both magic wand tool AND paint bucket tool, there is always a small uncolored area near the lines. I have tolerance on 30,  and anti-alias, contiguous and sample all layers boxes checked. (this setting worked on my old CS3) I have tried tolerance from 0 to 100, no difference. I have also tried unchecking the boxes I just mentioned, still no difference. I hope there is a solution for this, because it is tedious to always go to the Select - Modify - Expand every time I need to color some area. So how do I fix this problem? I use seperate layers for lines and colors, like I have always done with other Photoshop versions. Even in school where they have CS5 those normal settings work.

Hello Chris,
I don't think this is a "user error". I think Adobe should be able to program a state of the art paint bucket, which is capable to get this done right.
Other applications are able to get this done right.
Please don't fall into a programmer's ignorance ("this is done right by definition") but listen to us artists and improve this unintuitive behavior. Add something like "ignore transparent pixels", because this doesn't even work if you draw on an empty layer.
Thank you!

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