Compressor Stuck @ 99% for the 4th time...

I successfully got project 1 of 2 out yesterday, workflow went like this:
(From FCP) "Send to: Compressor" Select destination/compression settings. Submit batch (3 different timelines to be encoded." In this instance, Compressor successfully completed all but one of the three videos to be compressed, the first time. I had to resubmit the smallest clip of the three, a second time. Compressor than completed the job.
Next project (2 of 2)
Submitted two timelines to be encoded, via FCP>File>Send to>Compressor. First video encoded, second video got to 98% after 12 hours. Cancel encode, resubmit. Additional attempt....got to 99% after 3 hours. For third attempt, I first exported the clip as a "self-contained" quicktime file. Took that file into compressor, same result: 99% @ 3 hours.
It seems that my only experiences with Compressor have been this way. Crazy long encode times, and can't depend on it to finish any job I leave for it overnight.
For my 4th attempt, I will dump Compressor's history and restart.
Just finished my 4th attempt. Same failure...
Also, here is a sample of the log:
<mrk tms="314175845.019" tmt="12/15/2010 23:04:05.019" pid="393" what="service-request" req-id="8F0A772D-93FB-4BA7-BFEA-3D3B9A6439DC:1" msg="Error: unrecognized request."></mrk>
Here are the stats:
Macbook Pro 2.2 intel core 2 Duo,
4GB RAM,
OSX 10.5.8
500GB Drive w/140GB available.
Graid 2TB Drive w/1.35TB available, all media held here.
FCP 6.0.6
Compressor 3.0.5

The format of my source clips is an ugly blend, as I used 3 different cameras to capture the footage. It was a wedding, shot with 2 panasonic cameras outputting DVCPRO HD 720p60 960x720, and one canon 7D doing close-ups and pickup shots, outputting apple prores 422 at 1080x1920. However, I transcoded all of the prores clips ahead of time, into the same codec and dimensions as the others.
Sequence Settings are DVCPRO HD 720p60, with a 23.98 editing timebase
I'm compressing into MPEG-2 for DVD playback.
I am trying compressor repair right now.
I will un-instal/reinstall if this doesn't work.
I was curious how the multiple codecs might alter the output, but had successfully completed 3 other timelines with similar/identical content (relative to the codecs).

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