Copied applications get generic icons?

Lately, since about 10.4, I've been having more and more problems with applications losing their characteristic icons when they are copied from one volume to another. Right now, I'm in the process of trying to migrate from a PowerMac G4 to a Mac Mini so it's especially annoying.
For example, I have an application named Shutterfly SmartUpload on my external firewire backup drive, which is currently mounted on my Mac Mini. It shows its characteristic icon. But when I copy it to my Mac Mini's hard drive, the copy shows up with the generic application icon (with the letter "A" made out of a pencil, brush and ruler). The copied application launches and functions perfectly.
1) WHY does this happen? 2) Under Mac OS 9 this would occasionally happen and the cure was to rebuild the desktop; what's the cure under Mac OS X?

548/2994
Hi Daniel,
I would try first, a simple restart and a Permissions Repair, then if the problem persists,
a Disk Repair with Disk Utility, booting from the Tiger Install DVD.
If Disk Utility doesn't fix it, try then DiskWarrior.
HTH
Axl

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