Deploying to cRIO seems to work, but actually doesn't

When I deploy my cRIO application, all indications are that the deployment is successful, but when I reboot the cRIO, the old version runs; the new one didn't actually download.
1. Compile the FPGA VI.
2. Right-click on the RT build specification and select Build.
3. Reboot the cRIO with the NO APP switch moved to the left (i.e. don't run the startup VI).
4. Right-click on the cRIO icon and select Connect.
5. Right-click on the RT build specification and select Deploy.
6. Move the NO APP switch to the right (i.e. run the startup VI).
7. The old version runs.
I know the new RT and FPGA VIs actually compiled correctly- I can run them on my development machine.
Anyone have any insight?
Thanks,
-Ron

More news: I can ftp the files (startup.rtexe and startup.aliases) to the ni-rt/startup directory on the cRIO. When I reboot, the correct version runs. Assuming this procedure actually works and not some sort of time bomb, this issue is now only mildly critical- "just a routine emergency" as Ted Knight said in Caddyshack.
I'm running LabVIEW 8.5 under Windows XP. The controller is an NI-cRIO-9014. The chassis is a cRIO-9104.
-Ron

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