Desktop links, folders etc appearing in DW CS4 Local Files - please help

Hi
I have a lot of web 'sites' in folders on my desktop which I use to test things out like forms, lightboxes etc. None of them are live. I wanted to tidy up the desktop so created a new folder with the idea of moving all the dummy sites folders into it.
I moved one folder but when I moved the second, I got the message:
"The root folder you have chosen is the same as the folder for site 'ContactTest'. This may cause some operations, such as synchronization, to work incorrectly. Proceed anyway?".
As the folder I was transferring wasn't terribly important, I thought I would see what happened so ok'd it. I had a message about cache which I ok'd.  I don't remember the message.  When I tried the site, it wouldn't work so I decided to move it back out to the desktop.
When I did this I was asked again about the cache which I ok'd.  The result is that all my desktop links, web 'site' folders etc are now showing in the dummy website folder as files and sub folders?!  If I delete the links, they are deleted from the desktop.
I have no idea how to put everything back to the way it was.  Can anyone help me please?

I've just replicated my steps, and the cache message I received was:
"The cache will now be recreated because the name, root folder, HTTP address of cloaking settings of the site have been changed."
Can anyone help me with this please?

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