Difference?: Offset Audio Sync Tool and Audio Frame Offset Value

Here's my Set-Up:
Editing a project shot film, audio recorded to CD. Xfer'd to DVCProHD with audio synced up. Downconverted capture to DV for editing in powerbook.
Computer: 1.67 ghz PowerBook G4 with 1.5 GB RAM
Final Cut Pro Version: 5.0.4
QuickTime: 7.0.4
OSX: 10.4.4
Editing timebase: 29.97 non-drop
My problem:
I have clips that when played in the viewer are fine and in sync. When cut into the timeline some drift out of sync. If I apply the offset Audio Sync Tool at it's default 2 frames to the master clip and cut it back in it goes back to sync - for a while. Matchframe back to master clip and it's OK. Why is the timeline not holding the setting? Corrupt timeline?
When and how is the Audio Frame Offset (default is 4) found in Systme Settings/Playback Control used? Is there a relationship between it and the Offset Audio Sync Tool?
FWIW: tapes were batched captured - I have master clips that are all about 22 minutes long. I subclipped each take and scene for editing. When I use the offset audio sync tool I apply it to the long Master clips. The problematic Subclips don't seem to be affected if I try to apply just to them.
TIA.

Being exported from tower mac, not laptop... we have tried exporting directly from final cut and from quicktime pro... sync is off when played on PCs but seems fine on the mac...we have tried adjusting the frame offset as well... do think it could have anything to do with clicking the box "prepare for internet streaming"
Thanks

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Difference?: Offset Audio Sync Tool and Audio Frame Offset Value

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