Disappearing Colors show up only in the shadows of other windows

Ok - this is weird: I noticed that some colors in web designs I was working on were not displaying. Like a light grey nav bar shows up white. This is also true in certain applications - the light blue row color in Yojimbo and my font manager are not showing up.
And yet, if I drag my photoshop color picker over the areas that should be colored, it registers the correct hex color, but still displays it as white.
And then I realized that these missing colors show up in the drop shadows of +other windows+ when I place or drag those windows over the window with the missing color (my design or Yojimbo say).
I've restarted a couple times and recalibrated my display. This had no effect. The colors displayed normally when I logged in under a different user account, so I believe the problem can be isolated to a user account issue and not a display issue, but, of course, I am not positive about that.
Has anyone experienced this before, or have any troubleshooting advice.
Thanks!
Matthew

*iPod classic Feedback*

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