DiskUtility not repairing

Warning: SUID file "System/Library/CoreServices/RemoteManagement/ARDAgent.app/Contents/MacOS/ARDAg ent" has been modified and will not be repaired.
After I did a combo update to 10.6.8 from 10.6.3 (on top of 10.5.8), I started to receive the above message after using DiskUtility. No other changes are made reported to have been made to permissions. I ran DU before starting the SL upgrade, and between each OS upgrade.
I also was unable to install SecurityUpdate 2011-005 or 2011-006 after the combo update (installer failed mesasge), but was able to install 2012-001. While I saved the failed installer logs, I can't make out what the issue is.
Thanks.

This is an innocuous message that occurs regularly. You can safely ignore it. The message will recur every time you repair permissions.
Mac OS X- Disk Utility's Repair Disk Permissions messages that you can safely ignore

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