Display is wrong on the shadow side after updating to OSX 10.9.2

After updating to OSX 10.9.2, Aperture 3.5.1 begins to display wierd shadows.  Even if the value of the black point is set to 0, the black appear to be blotching although there is no clipping appearing in the histogram. Lightroom and other 3rd party programs appear normal.

I shoot raw and I use a Canon 5D Mark II. Here is a grab from one of the pics.  Note the muddy color of the green in the shadow and the black and the surrounding.  This is not so when opened in lightroom or any other raw processing software.

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