Do out of order iTunes 11 tracks sync to iPod?

The upgrade to iTunes 11 caused various albums to show out of order track listsings in expanded view.  We haven't re-synced our iPod to iTunes since the update for fear that this mis-ordering will be brought over to the iPod.
Will the new track ordering move to the iPod on sync?
Is there any way to force the old ordering?
We've looked at a lot of solutions on line, none have helped, they're for previous versions.  We see a correlation between the albums we ripped from CD and the ones that are mis-ordered.
All help appreciated!!

I just reformatted the files to MP3 and it took care the problem.

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