Does Migration Assistant use the most recent time machine backup?

About to transfer my old macbook pro harddrive to my new imac..and when im in migration assistant it allows me to select ALL applications (not individual ones unfortuantely) to transfer from my time machine backup...curious, does it transfer all apps I have ever had on all my backups? - there is probably 20 different backups. I have cleared a ton of useless apps off my MBP and did a fresh backup hoping those would be the only ones to get transfered?
Thanks

Only one version is transferred, the last saved one.

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    Here are the articles I have on Migration Assistant. None of them had the answer to your problem (or at least I couldn't find it). Check what you did versus the recommendations in the articles is about the best I can offer.
    Migration Assistant
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    Migration Assistant – Tips and Tricks

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    No, both the backup and the new system are OSX10.6.
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