Does the ipad backup save files within an app?

I have lots of pdf files within adobe reader on my iPad. Now, if I do a backup of my iPad on my PC...
Are these files saved on my PC?
Are these files accessible from my PC in case i lose my iPad?
In case I lose my iPad and restore it to a new iPad will my files be restored along with the apps (e.g. pdf files within adobe)?

App data is contained in an iPad backup.
There are some PC programs which can extract data from an unencrypted iPad backup file if necessary.
App data will be restored to a new iPad.

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