Downloaded an app and now my safari keeps popping up with ads and words are hyperlinked on webpages. Does anyone know how to fix this?

Hi,
I was downloading Skype for mac last night, and now my safari isn't working correctly (has a lot of popups and and words are hyperlinked on my webpages I pull up now. I think I have the 'DownLite' trojan but I am unsure of how to get rid of it. I saw a post in March that Linc helped with describing how to fix it, but unfortunately, it didn't work for me (because I think mine is in a different folder but am unsure how to find it). I have the UNIX shell script diagnostic scan if needed. Can anyone help me get rid of this?? Thank you for your help!
-T

1. If adware is installed without your knowledge,
    download  free AdwareMedic by clicking “Download ” from here
     http://www.adwaremedic.com/index.php
   Install , open,  and run it by clicking “Scan for Adware” button   to remove adware.
   Once scanning and removing the adware is done, quit the app by clicking AdMedic in the menubar
    and selecting “Quit AdwareMedic”.
Safari
2. Safari > Preferences > Extensions
    Turn those off one by one and relaunch Safari again to test

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