Dual-Boot; Restart and boot other o/s USB devices not working

I have issue with my msi z97-g43 mobo and Windows dual o/s PC.
Booting with win-8.1, USB devices working very well.Restaring windows 8.1 have NOT any issue.
After shutdown & start PC, choosing to boot windows 7 on bootmanager, USB devices not working in Win-7.
System no hang or occur any error/BSOD message.All startup programs run as normal.
I tried to re-plug usb devices but notting happens...  Still not working
But after the win-8.1 shutdown, if i switch off PSU power button, watting ~1 munute for discharge.
After power up PC and boot with windows 7 all usb devices works normaly.
I checked all internal connections. 2 times disassembly all hardware and re-built system, nothing changed.All windows updates and latest drivers installed.
I'm sure other H/W is OK, but I thnik this mobo have a fault.

Thank you for reply.My PC system specs:
CPU:    Intel Pentium G3258 3.2ghz
Board:    MSI Z97-G43 /Bios: Ver. V17.7
MEM:    G.Skill Ripjaws 2x4gb DDR3-1600mhz cl9 1.5v F3-12800CL9-4GBRL
VGA:    Sapphire AMD Redeon HD6670
CASE:    Zalman z3 plus white (5x 120mm fan)
PSU:    Thermaltake Litepower 500w (12v1+12v2=36amp)
HDD-1:    Seagate 1TB ST1000DM003 /HDD-2: Seagate 2TB ST2000DM001
COOLER:    Akasa 92mm PWM Blue Led
OC:    CPU:Default /MEM: X.M.P mode=1600mhz 9-9-9-24-2t 1.5v
O/S:    Win7 x64 PRO + Win8.1 x64 PRO (Genuine)
All hdd's have MBR based partition table.Windows 7 & 8.1 installed in non-efi mode.In BIOS Boot sequence is setting up to non-efi Boot(system) drive as primary.
Before I suspect maybe have a short circuit to pcb or similar thing cause this issue.I take out all parts outside the chassis, and ran this system on the antistatic bag and box.Nothing has been changed.
I have Cooler Master Devastator(MB24 + MS2k) USB keyb+mouse set and tplink wn722n usb wireless dongle.
I have one more pc,based on AMD 970+SB950 chipset mainboard and AMD CPU.I exchange all parts to this amd mainbaord and tested for faulted hardware.All intel system H/W's is ok.All works great
Dual boot works perfectly.Not needs to switch off psu/power back and run system again.
I think msi z97-g43 mainbıoard have a problem.

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