Dynamic Link Replacing w/ After Effects

I'm on a PC Windows7 Home Premium 2.88 AMD w/ 14GB Ram--- Production Premium CS5-
I have two cameras I am  editing a wedding.
Camera 1's footage containing about 6 seperate files is on one path of the time line (path 1)
Camera 2's footage is on the second.
I trim the clips to have the entire ceremony go from camera to camera to create the best scenes for the ceremony.
Since SA's Color Finesse has better features to color grade, what I did was right click the cut clips and clicked 'replace w/ after effects composition.' The first one asked me to save a file which I did. I then went down to the different cut clips (some of them on the same source file, some not and I sent them to AE in the same fashion to grade.  One time AE and PP crashed and when I reopened the project, the clips were red. I was able to manually relink the clips, but when I when I closed the programs and wanted to do this same process, I had to save another file which then made all the clips I had previously worked on red and missing.
I know there must be a pattern or rule that must be followed or else it all goes to crap. What is the pattern???
I also tried to color grade in AE and then I sent the AE file into PP it said that it did not have SA Color Finese 2.0 in PP  (which mine is suppossed to be 3.0 in AE), thus all my work that way is wasted unless I render.
Thus, I want to be able to trim, arrange my clips in PP, then color grade w/ SA CF in AE. I don't like the color tools in PP.  Am I stuck w/ having to buy something to color grade in PP? 

Yea man,
Here's the problem I had and would have if I continued doing this...
Timeline1- 3 clips----Day 1- you place effects on clips 1 and 2 w/ 'Replace w/ AE comp'. W/ 1st clip it prompts you to save an AE PROJECT file that becomes the link...it creates the AE comp file and places it in the PP project bin. Clip 2...as long as the AE PROJECT file that is linked to the first file is open, I can create a dynamic link for the second file and it automatically creates the AE comp in PP....Here's where the problem happened...
Day 2- so I come back the 2nd day (or whenever)... I had closed and saved the AE and PP project files that are linked together. When I open the PP project I'm working on, the dynamic links for clips 1 and 2 are in the bin...no problems. But, if  I go to clip 3 to replace that one w/ an AE comp., when AE loads, it prompts me to save an AE project file again...If I save ANOTHER PROJECT file, then all the AE comps linked to the previous PROJECT file get delinked. What actually seems to happen is that clip 3, since it is technically the first comp in this NEW AE PROJECT file, the effects applied to clip 3 and clip 1 become tied together. Ex...If I do adjustments to the AE comp that is linked for clip 3, say I just make it bright blue just to see the effect, not only does clip 3 turn blue, but clip 1 also turns blue....The solution to this is when I open PP and want to go to my next clip, in this case clip 3, I need to open the original AE PROJECT file that is linked to clips 1 and 2.  Then, if I do this, it automatically creates a new comp for clip 3 (it doesn't prompt me to save an AE PROJECT file) and there are no problems. That is the solution.
Important notes--- When I create the AE comps and they get loaded in PP, I did not rename them something else. I just kept the generic name AE and PP created for the linked file.  I need to test what happens when I go and rename the created clip to see what happens.
Also, I do not know what happens in different time lines. All the work I've done has been in 1 time line and 1 timeline only.  And, I have all the work on one path in the timeline, meaning I do not have clips stacked on one another.
From now on, when I want to replace PP w/ AE comps, I will always open the original AE PROJECT file that is linked to that PP project and can easily access this file by right clicking an already replaced (linked) clip and choosing 'edit original.'
So basically what you were duplicating with your tests failed to close and save PP and AE, then reopen PP, go to another unlinked clip and hit 'replace w/ AE comp." It should ask you to save another AE project...do that and you'll lose your other linked clips but 1 and the new one you are creating that first time. It does it on my system 100% of the time. I'm going too test it now BUT rename my comp links.
I'm really not that worried unless it is a bug in my program because I can always just open the original AE Project when I want to replace the clips. Thus far, it has worked w/ dozens of unique clips using the same source files as well as different source files. I have not had one problem w/ broken links provided I do this. It scares the **** out of me though not knowing what could happen, but I'll be keeping a close eye out and saving my work on a regular basis as I progress.

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