Effects and key-frames not working on some clips Premiere CC 2014

Hi. I am having an issue where effects and key frames applied to both audio and video are not working, but only sometimes. Even after I render or export the video, the effects are not showing up. For example, trying to adjust volume using key-frames on some clips works fine, and not at all on others. The key-frames show up and I can see the volume changing in the effects panel, but it is not happening. Another example is changing the opacity on some video clips and it does not work sometimes. Same thing, I can see the key-frames and the values changing, but it's not actually happening. I have uninstalled and re-installed premiere pro and media encoder with no luck. I have uninstalled and re-installed the latest Nvidia drivers with no luck. Just to restate, this only happens on some clips and rendering or exporting the video does not help. My computer specs are:
MSI GT60 Laptop:
Intel Core i7 4800MQ (2.70GHz)
16GB Memory 1TB HDD 128GB SSD
NVIDIA GeForce GTX 880M 8GB
2880 x 1620 16:9 3K Display
Windows 8.1 64-Bit

Here is the exact screenshot.  Now I'm also trying other effects as stated in my original post.  But this effect is just an example.  Is there really something that I'm doing wrong here?  Or am I forgetting something?  Is there some special "adobe doesn't let keyframes work on mpg's" rule or something silly like that?
I wish that I could post a video, but I don't know how.
Please let me know what I need to do to make this work properly.
TEX

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