Encore CS6 not possible to avoid transcoding

Why does encore CS6 transcode some H.264 streams and some not? They are different sequences exported from the same project with the same settings out of premiere CS6. The parameters of all streams equal the settings in encore. But for some it is not possible to change the setting in encore to not transcode.

Yes, I used H.264 Bluray 1440x1080 anamorph. I guess Encore ignored the anamorph flag for some files and transcoded them a second time to 1440x1080 - the result is a visible frame with a distorted 4:3 aspect ratio. I have found a resolution. I replaced the transcoded files in the encore transcode folder with copies of the original files and renamed them like the transcoded files: "original filename"_sessionFiles_Asf_session_1_video.m4v
Perhaps its possible to avoid transcoding by simply placing renamed copies (in that name system above) of the original files in the transcode folder. I will try it in the future.

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