Encore Cuts off about 15 minutes of my video after I author it, Please Help!

Hello everyone,
I am not really a stranger to Adobe products but I am having a problem with Encore which is driving me crazy.  I am authoring a dvd of some home movies and a slide show to send to some relatives as a Christmas gift.  I have to send it out so it absolutely MUST be done within three or four days.  I have done every single thing perfectly and I finally went to build an ISO of the final result of all my hard work, only to find that once I mount the image and play it back on PowerDVD, the last 15 minutes or so of the main movie was cut off!
What is going on here?  It shows up perfectly in Encore in the Timeline I set up.  The individual files I encoded play perfectly all the way through.  The main movie is long, about 2 hours and 41 minutes.  I expect to be using nearly all the space of a dual layer dvd, roughly 8gb or so.  Anyway, on the authored DVD, the runtime of the main movie is just 2 hours and 29 minutes.  It simply stops at that point and goes back to the main menu. 
Also, as perhaps should be expected, my chapter points on the second half of the movie are screwed up, no doubt due to the screwed up timeline.
Anyway, how can I get the whole movie to show up on my encoded DVD?
I know it is not a DVD space issue because it comes out to just over 8 gb.  And besides, I am not yet burning it to a disc, I am creating an ISO to test so size shouldn't even be an issue.  If space WAS an issue, I would just re encode the video with a lower bitrate until I could barely fit it on a dual layer disc.  But as I said, I am sure that is not even relevent here.
Could someone please help me here?  A very important Christmas gift is dependent on me being able to finish this project in Encore.
Thanks so much.

Please post a screenshot of the flowchart.
I think the single 2 hour 40 minute video is asking for trouble if you don't need it to be so long. In a compilation type DVD, it is usually not necessary. If you are putting multiple videos on one timeline, that is also more likely to encounter problems than making each video its own timeline and using a playlist for a "play all."
Despite your confidence that certain things cannot be issues, they can be.
It does sound like all should be well.
Also, as perhaps should be expected, my chapter points on the second half of the movie are screwed up, no doubt due to the screwed up timeline.
Also, chapter problems may be causing the truncated movie.

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