Exchange 2013 and SCOM False Events

We are having many problems with the health monitoring of exchange in our SCOM 2012 environment. We have 9 exchange servers, with 3 DAGS across the 9 servers. WE are constantly getting health events in SCOM, even for monitors i've explicitly disabled. For
example, the FIPS monitor. Following this guide (http://blogs.technet.com/b/exchange/archive/2013/08/13/customizing-managed-availability.aspx) i disabled the FIPS probes/monitors all together across our entire Exchange environment, and yet in SCOM, all 9 servers
show this monitor as being unhealthy. Is my understanding on this functionality incorrect, or is it just not functioning properly?
Similarly, even when an Exchange monitor is completely healthy, it shows as unhealthy in SCOM. Right now, HubTransport shows as unhealthy in SCOM For all our Exchange servers, but when i run this command everything shows as healthy, across all servers.
Get-ServerHealth <server name> | ?{$_.HealthSetName -eq "HubTransport"}
I understand that these monitors can be unhealthy for a while and correct themselves, but shouldn't that correct them in SCOM as well? And for disabled monitors, like FIPS, they should never be unhealthy at all. So why are they showing as unhealthy in SCOM?
Am i expected to reset health in SCOM every time an unhealthy flag is thrown in Exchange?
From what i've seen there is a huge discrepancy between how SCOM works and how Exchange monitors work. They don't seem to integrate well, at all. Does anyone have any suggestions on getting Exchange 2013 monitors to work properly in SCOM? Is this my error
as a user, or is it just bad software

Hi,
I recommend you use the Get-HealthReport cmdlet to check Exchange Server health again.
What's more, please verify if the account you use has the Organization Management permission and Server Management permission. Also, you can change an account and see the result.
Moreover, please take your time to post the unhealthy information from SCOM monitor about Exchange server for my further research.
Hope my clarification is helpful.
If there is any update, please feel free to let me know.
Best regards,
Amy
Amy Wang
TechNet Community Support

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    On TMG side direct all the traffic to 2013 and it will redirect to 2007.
    you would need a new public host record for the legacy url.
    2. If all that is indeed correct then why the Technet article still make it sound like that the legacy host name is mandatory?  http://technet.microsoft.com/en-us/library/jj898582(v=exchg.150).aspx 
     (Step 7)
    PN Answer: Yes we need legacy url
    Regards, Prabhat Nigam XHG and AD Architect and DR Expert Website: msexchangeguru.com VBC: https://www.mcpvirtualbusinesscard.com/VBCServer/wizkid/card

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