Excluding items from back up and Time Capsule not recognising ext HD

I'm relatively new to the world of Time Machine and Time Capsule. I have a 250Gb iMac, but because my iTunes library was becoming so large I purchased a Iomega 500Gb ext HD and transferred it over to this where it is currently occupying about 350Gb of space. I still have about 220Gb duplicated on my iMac at the moment as a kind of back up. I then discovered Time Machine and because there was only about 100Gb of space left on the ext HD to do back ups on I excluded my music and iTunes library from this. This has been going along fine for the past month.
I purchase a 2 TB Time Capsule (TC) yesterday. I reconfigured Time Machine to use the TC as the back up and I removed the excluded music/iTunes library so that everything would be backed up. As soon as I asked TM to back up it started excluding millions of items which I am assuming is related to the ext HD since when I turned this off it started to back up my iMac computer content correctly. However I want to be able to back up the stuff I have on my external HD so that I can eventually delete all the duplicated stuff off the iMac. I read a similar post on here about this and have tried deleting all the old TM backups but it is still not recognising the ext HD. I currently have it connected via an ethernet cable just to speed up the initial back up. Any help or explanations would be greatly appreciated.

Dear Bob
Thanks for trying to help me with this
Bob Timmons wrote:
I read a similar post on here about this and have tried deleting all the old TM backups but it is still not recognising the ext HD.
Sorry, I am confused here. You mention that you have a new 2 TB Time Capsule, yet talk about trying to delete old TM backups. What old TM backups, if you have a new 2 TB Capsule? Can you clarify, please?
but it is still not recognising the ext HD
A bit more clarification here, please.  When  you refer to "it", do you mean Time Machine?
Time Machine will not backup an external drive connected to a Mac unless the drive has been formatted in Mac OS Extended (Journaled). Did you format the drive this way when you first got it?
If the drive was formatted as FAT32 when it was new, it would work OK if you attached it directly to your Mac. But if you want Time Machine to backup the Iomega drive attached to your computer, the drive must be formatted correctly to work with Time Machine.
If you have the drive attached to the Mac and you open Time Machine Preferences and click Options, can you "see" the Iomega drive and not select it, or can you not "see" it at all?
If you can "see" it, but it is grayed out so you cannot select it, the drive is not formatted correctly as mentioned above. If that is the case, you will somehow need to copy all of the data on the drive to another location, format the Iomega drive to use Mac OS Extended (Journaled), and then transfer the data back to the Iomega drive. Then, Time Machine will backup both your Mac and the external drive attached to your Mac.

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