Exported clips out of sync if I use Compressor

I have about 100 clips that I need to export from FCP to transcode to .wmv's. If I export to Compressor and use a custom .wmv preset there, the audio is out of sync. Not just a couple of frame as if it were 29.97 to 23.98 or 44.1 to 48 khz, but immediately about one second out.
I have checked my clip settings to make sure audio and video are the same for Compressor.
If I export using "Quick time Conversion" from FCP, then they are in sync. I would rather set a batch in Compressor than individually exporting 100 clips.
Clips are DVCPROHD/60, 48khz, 23.98 (I don't know why they were recorded 60p at 23.98)
Export settings: 1280 x 720, 23.98, 48hz, .wmv
Thoughts?
And, thank you.

I have seen more posts recommending that you not send files to Compressor from FC. Most recommend exporting a reference or a self-contained QT and then compressing the export.
If you are still having issues with the wmvs you may want to consider purchasing flip4mac(full version).
I prefer Episode to F4Mac or Compressor when creating wmvs but Flip4mac is the best option for the price.
I do not believe you can batch export/compress with flip4mac but the results are usually worth it.

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