Exporting self-contained from DVCPRO HD is Stuttery

I have my DVCPRO HD timeline (720p). When I export using "Quicktime Movie", select "Current Settings", and check mark "make movie self-contained", The resulting movie is a bit stuttery compared to my original timeline. Almost as if I was watching a bad conversion of 23.98 to 29.97 timebase. The weird thing is that some shots are smooth, but it could just be my eye :S. Is this stuttering occuring due to the re-compression process of making a self-contained movie?
How would I be able to export a quicktime movie without the stuttering? Would I have to use "Quicktime conversion"?
EDIT: "Recompress all frames" was NOT CHECKMARKED!! Maybe I should checkmark it?

Theoretically, DVCPRO HD 720 should play back off a FW drive.
But if I had a dollar for every issue with shared bandwidth between firewire drives and camera/decks on a single firewire bus Mac.
Others may disagree, but I strongly urge that you:
1. dedicate an internal SATA drive for media
2. Or use a SATA PCI controller and external 2/4 drive SATA enclosure.
Don't know what your camera is, but if you're working in PROHD, it's at least a HVX200.
Throughput is 4 times the overhead as DV.

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    VideoJunkie88 wrote:
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    Message was edited by: videocrafter

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