F.13 Consolidated companies " " and " " are different

Hello gurus,
I have seen many threads on this, but I have yet to find one to answer my particular issue. 
When we run F.13, we are getting the error message stated in the subject line above.  We are using two document types here:
WE:  Goods receipt
RE:  Incoming invoice
I have checked the document types in OBA7, and both have been flagged to "Allow Inter-company posting" and "Enter Trading Partner".
I have checked the Master data for the vendor and the trading partner field is filled in.  I can not clear out this field, since it is used for some of our quarterly reporting.
When I go into FBL3N to look at the item lines, I am seeing that the items lines with document type WE (goods receipt) is pulling the number in the master data in to the trading partner field.  This is correct.
However, when I look in FBL3N at the item lines with document type RE (incoming invoice) the trading partner field is blank.  We enter out invoices via MIRO. 
Does anyone know why the "RE" document is not pulling in the trading partner number?
Thanks for your help,
Rhonda

Hello Dominic,
Here is how I have the document types configured:
WE: (Goods receipt), has the "Allow inter-company posting" flagged on.  Plus, the posted document has the trading partner displayed.
RE: (Incoming invoice), has the "Allow inter-company posting" flagged off.  Plus, the posted document does not have the trading partner dispalyed.
So, it matches your train of thought in above response.  However, I am still getting the same error on the pre-existing documents.
Then I have tried every other combination between the two document types and I keep getting the same error.  The pre-existing documents will not clear.
Is there a way to update the trading partner field in the pre-existing documents?
Sorry for all the questions.
I really appreciate all that you have done for me.
Thank you so much for your help,
Rhonda

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