FCPX final product has been exported but it is choppy and seems like its missing frames

The Problem: FCP X .mov finished product is choppy in its play back (i checked through different programs, itunes, vlc, windows media player, QT, Also different computer platforms and operating systems. same choppy playback) so its a problem on FCPX's rendering etc.
What I know: The input file is a ripped DVD I own thats been handbraked to mp4. Its a clean rip and convert, I can play it through any media player on any platform/OS and its very smooth just like the DVD.
                       My project settings are for SD DVD video. They are NTSC SD, 720x480 DV Anamorphic and 23.98p fps settings. During the editing process
                       I have not touched the video so all those setting are default or should be anyways.
                       The only things i can think of now out of the ordinary are:
                       1. The settings of DV Anamorphic, should it just be 720x480 DV or 720x480 in the settings for resolution- I don't know what DV or anamorphic                            means.
                       2. The mp4 file input (the harry potter dvd rip) is resolution 720x360. Does that factor in?
                       3. This is FCP X the trial version. I dont know if that changes anything.
Background Info: I'm taking the harry potter DVD and matching it with the audio from Brad Neely's soundtracks. The timing is perfect, the sound is ok. Now I was hoping the finished product would be good to go, but its not.
Any idea of why the FCP X output file is choppy (like its missing a few frames here and there and skips from frame to frame so its not smooth) when watching the final product?
system specs:
                       Mac OS X (10.7.4)
                       2.5 GHz Intel Core i5
                       4GB 1333 MHz DDR3
Any help is greatly appreciated. Thanks.

i also forgot to add that in some places there is a green screen for a brief second.

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