Files Copied to USB Drive Disappear

I attached a WD USB drive formatted as FAT32 to my new Airport Extreme but cannot seem to get it to work correctly. I try to copy a file to it, it appears to copy fine (copy finishes, the file shows up in the drive) then a few seconds later the file disappears. I then hooked the drive directly to my Mac and, sure enough, the file is not there. I hooked it back to the AEBS and tried copying a file to it from a PC. Same as before, all appears to go well but the file doesn't actually get copied. Any idea what might cause this and how to fix it?

This morning I was playing around some more and found that some of the files I tried to copy to the drive now show up when the drive is connected to my Mac but are still not visible when connected to the Airport Extreme. I have a different drive that works fine but it is smaller (500GB vs 750GB).

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