Files removed from folders, added into a "new folder with items"

Just found files missing from document folders in multiple places, all appear to have been moved to a single folder called "new folder with items" under my user folder. Folder structure all in tact - just files all (or rather nearly all) moved.
I'm restoring from back up now but ***?! had this mac for a year with no issues until now. No major tinkering done on the mac to have caused such a dramatic issue.

If the directory name were random (most likely not even readable), that would mean the file system is corrupted and in need to be repaired ASAP, but as the name is in plain english it seems it was assigned programmatically.
As most Unix derivatives, Mac OS X has a program called fsck.
Each time a disk is "mounted" fsck checks if the file system is in a consistent state. If "dangling" files are found, they are collected in a special directory called "lost+found".
Apple could have changed fsck to create a directory "new folder with items" instead of "lost+found", but I think this is unlikely.
Perhaps someone more familiar with fsck could confirm, but in the meantime I would not rule out other theories.
P.S.
The files could still have been selected from the "All my files" category on the sidebar which looks like "flat" directory as far as the finder is concerned.

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