Final cut bug, interlacing when adding transitions

Hello
So I have been experiencing a problem in final cut pro 6 when generating a timeline using motion jpeg A and using transitions that all clips end up looking interlaced. The fields in the sequence settings are set to non and all the settings are at high quality. All preferences and settings have been checked a hundred times over. Even soemtimes in the past generating a new sequence and copying your timeline to the new sequence would sometimes resolves some problems.
After weeks of banging my head against the wall I managed to find out that importing quicktimes into final cut would default the field on every quicktime to upper odd, causing this problem. Changing this option to none seemed to fix the problem. In saying this, this is not ideal as if you were working with say 40 quicktimes or more you would have to manually change each field to every quicktime before you start your timeline. Not good.
Has anyone else experienced this problem and if so have you found a better way around it?
Thanks

Same Issue: Added a transition and then beach ball from **** and crash. Also lost two hours of work when it restarted and reverted to the last planned quit.
FCPX is benched until Lion and updates. Don't have time to be a beta tester on what might end up being a hobbyists toy.
MacPro Quad 3.0, 10G RAM.
Mark

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