Final Cut Pro X and glitches in 1080p HD video

When I use final cut pro X, the HD 1080p video I upload is extremely glitchy (video does not play smooth, audio issues). When I play these files in Quicktime, the glitches do not appear and the video runs smoothly. I have 16gb of RAM, 2.5 GHz Intel Core i5 OSX 10.8.2.
Has anyone had these issues before? If so, what can I do to fix it? Upgrades, etc?

iSkySoft is horrible. This has not been converted to a suitable format. The media needs to be QuickTime using a production codec like one of the ProRes codecs. If you're going to using 264 it needs to be H.264. The video should NEVER have compressed audio for production. It should be uncompressed Linear PCM and should be the video sample rate standard for 48k not the CD standard 44.1. The frame rate shouldn't be 59.93 but 59.94.
If you only have the .mts files not the whole folder structure, you should use either ClipWrap or Media Converter to rewrap to QuickTime.

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