Finder doesn't show some files after several days of uptime

It is several days my MacBook Pro is turned on:
$ uptime
11:08  up 10 days, 12:02, 2 users, load averages: 1.12 0.80 0.60
and Finder is starting to behave strange...
the first thing I noticed is that it doesn't show anymore the contents of application packages (ie. right click on a .app and click Show Contents, shows an empty finder window, like there were no files, but from Terminal I'm able to see contents).
also some other files are not visible. for instance I just downloaded a file in Safari, but I can't see it in its folder with Finder, but I can see it and open it with Terminal.
before trying a reboot, what could I do to solve this issue?
perhaps restart Finder? but what is the correct way of restarting it? killall Finder (or some signal other than SIGTERM)?

To restart Finder, hold the option key whilst "right-clicking" (or two-fingered tap on a trackpad), on the Finder option in the Dock.
You will see an option to "relaunch".  Select it, and Finder will restart.

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    2014-04-14 00:56:26, Info                  DISM   PID=6888 TID=6828 Scratch directory set to 'C:\$SysReset\Temp'. - CDISMManager::put_ScratchDir
    2014-04-14 02:41:53, Info                  DISM   PID=1068 TID=4108 Temporarily setting the scratch directory. This may be overridden by user later. - CDISMManager::FinalConstruct
    2014-04-14 02:41:53, Info                  DISM   PID=1068 TID=4108 Scratch directory set to 'C:\Users\R0027~1.JSA\AppData\Local\Temp\'. - CDISMManager::put_ScratchDir
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    2014-04-14 02:41:53, Info                  DISM   PID=1068 TID=4108 Scratch directory set to 'C:\$SysReset\Temp'. - CDISMManager::put_ScratchDir

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