Grey boxes with question marks

When I view some PDFs, a grey box with a red question mark inside appears. I cannot move, edit, or delete these boxes. I searched the web and most of the responses indicated that such boxes indicated corrupt images, but my documents do not have images. Mine appear at the start and end of text blocks. They do not appear in thumbnail view. I am running Acrobat Professional, version 8.1.
What are these boxes and how can I get rid of them?
Attached is a screen shot of what I am seeing.
Robert

A little more info to follow up the excellent diagnosis.
When Acrobat opens a PDF and it finds annotations of an unknown type it shows these boxes. The way to get them to disappear (or change to something else) is to install a specific plug-in designed to show them.
Older versions of Acrobat would just show nothing at all.
Acrobat 5 would show nothing.
Acrobat 7 would show the boxes.

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