Having problems synching my iPad with my mac

Hello,
I have one of the original iPads, bought about 18 months ago.  I originally synched it with an old PC, which is no longer in use.  I have a new-ish MacBook Air, which is where I would now like to synch to for my photos, itunes etc.
I have just tried to synch my ipad to the Macbook, and although it did do it i.e. it transferred photos from my MacBook to my iPad, it DIDN'T transfer all of the purchased content that was new on my iPad i.e. some apps that I had downloaded from the app store, and many books that I had purchased from the amazon Kindle app.  or, if it did download them, I can't see them......
Basically, I would like my iPad to recognise the MacBook as being the new place to automatically synch with, and to have all downloaded apps and content held on both sites.  How can I achieve this?  I am also a bit confused by the 'Cloud' concept - is this somethign I should be using to share content between the devices??  I also have an iPhone, and I haven't even started the process of synching this yet......
Any advice would be appreciated.....
Lucy

It sounds like you are heading in the right direction. You did authorize the new computer in iTunes>Store>Authorize this computer?
Amazon books are stored on Amazon's servers and you cannot transfer them into iTunes. You can log into your Amazon.com account and got to Manage Digital Content and you will see all of your purchased books in there.
As far as Apps that did not transfer, the first question I would have is did you buy these apps with another ID that you are currently using in iTunes on the Mac? Are the apps in your iTunes library and if so, did you select them to sync to the iPad? If the apps are not in iTunes did you transfer the purchases into iTunes? If you didn't, I am guessing that iTunes erased the apps from the iPad and you didn't mention that.
Connect the iPad to the Mac, launch iTunes, click on the iPad name on the left, click on the Apps Tab, click on all of the apps that you want to sync, make sure that the sync apps heading is checked and then click on Apply in the lower right corner of iTunes.
If you haven't transferred all of your purchased content into iTunes, you might find this discussion to be helpful.
https://discussions.apple.com/thread/3305461

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