Having trouble getting your iphone sync with itunes? Click here.

I, myself, has been one of the many people facing issues with their iphone (5S) being recognized or syncing with itunes after the new update, however, after calling an apple specialist, she taught me how to fix the problem.
You have to completely uninstall itunes and all of it's components (Apple Software Update, Apple Mobile Device Support, Bonjour, Apple Application Support). Simply uninstalling itunes won't do the trick. You have to manually uninstall all of the listed program in your computer's uninstall programs page.
Please uninstall it in this specific order
- itunes
- Apple Software Update
- Apple Mobile Device Support
- Bonjour
- Apple Application Support
And then reinstall the latest itunes at :
http://support.apple.com/kb/ht5654?viewlocale=en_US
Connect your iphone and it should be good to go! It definitely worked for me! Hope this helps you! Cheers!

Doublechecking. Have you also tried a complete uninstall of both iTunes and all the other related software components and then a reinstall? If not, try the instructions from the following document:
Removing and reinstalling iTunes and other software components for Windows Vista, Windows 7, or Windows 8

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