Help! Trying to record/render high speed movies (1/1000fps). Can I do this?

I am trying to make high speed movies of the twitches. My camera can do up to 1/10000 fps analog but I cannot change the raw video fps. I believe it is 29.97, because of this each frame has 2 or more captures on it. No good! Can anyone help.

What camera is this? How is it recording the footage?
I had footage from a camera that shot at 2000fps to a hard drive..a high speed computer camera. That raw footage wan't something I could use in FCP, as it was some proprietary format. They needed to export it from their system as a Quicktime movie...Animation codec. And it being a computer camera, it captured with computer monitor dimensions, 800x600. So I had some resizing to do.
How does your camera work?
Shane

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