Help with moving hard drives

Hi all,
I'm having an issue. My iTunes library is spread across 2 external hard drives, because it's too large to fit on one. Today, after OS X hard crashed, one of the disks is reporting that Disk Utility is 'unable to repair' the disk and that I should back up my files. If I now plug it in, it says
Mac OS X can't repait the disk 500GB1 [that's the drive name]
You can still open or copy files on the disk, but you can’t save changes to files on the disk. Back up the disk and reformat it as soon as you can.
(The other disk with the other half of my library still works fine)
Fortunately, I have a spare drive lying around which I can copy the files to; however, this will I believe screw up my iTunes library file, as every file on the first disk will now be in a new location and thus missing according to iTunes. Is there an easy fix for this? Many thanks.

Sorry, I should have mentioned: the new disk is also not large enough to hold my entire library (otherwise using consolidate might be an option). I can't afford to buy a drive of that size at the moment.

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