High ISO RAW files not importing properly since upgrading to Yosemite

Since updating to Yosemite I am having a problem with trying to use RAW files shot at ISOs higher then 800. I am simply getting a black rectangle with a message about "unsupported file format". I am able to import the images using the Canon software, then convert them to JPEGs.

Hey Ronin, thanks for your reply! The audio codec is Linear PCM.
The audio codec options I have, from redcine-x, are:
Linear PCM
AAC
Apple AES3 Audio
Apple Lossless
MPEG-4 AAC Enhanced Low Delay
MPEG-4 AAC Enhanced Low Delay with SBR
MPEG-4 AAC Low Delay
MPEG-4 HE AAC
MPEG-4 HE AAC V2
Would one of them be better?

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