How can I put transitions btw clips that both use green screen?

Seems that when I drop the transition between the clips (between the backgrounds -- it won't let me drop the transition between the videos shot with the green screen), it then pushes the green screened video clips together, and the transition doesn't play at all!

iMovie does all rendering in one pass. This effect would require a nested render, which FCP excels at.
If you want to do this in iMovie, do the first green screen clip. Share it using Export Using QuickTime in Apple Intermediatae Codec. Do the same with the second green screen clip. Then import both clips into an iMovie event. Now you can drag both these clips into a project and put a transition between them.

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